Hi,
Your biggest problem is due to you purchasing the wrong type of drives to use in your RAID array. The Western Digital Greens are not at all suitable as they are designed as "Green" power saving devices which means they are always trying to power down. This is no good for a RAID system. Not only that but they don't ramp up fast enough and the RAID controller will probably not pick them up to start with.
You really need something like the WD Blacks for what you are expecting to do. You could try adding a HDD delay in the BIOS to give them the chance to start up in the first place but even then they are not designed for this environment.