Chubby,
Do a full shutdown of you computer and leave it off for 10 minutes. While waiting open up your computer case and double check that the 120 mm fan on your" be quiet dark rock advanced" is properly installed and free from any possible interference by wires, HSF block or fan casing attachment. Check for dirt anf debris. make sure it spins freely. If all is fine leave case open and reboot. Stop in BIOS and double check that the BIOS CPU Fan speed control option is indeed disable. Resave BIOS and boot to Windows. Assert Fan status:
Working full time - do small celebration tap dance...
Fan still intermittent - Scratch head and ... answer these...
Do you have any other type of fan control applications on your system such as Speed fan..? if so could it be the culprit...
Do you use any activated Power management features in BIOS? Iif so which one?
Try plugging your HSF fan into another motherboard outlet, remember to disable CPU fan speed warning in BIOS prior. Keep a close eye on the HSF fan to make sure that it runs.
Run a cpu temp monitoring program such has Real Temp 3,67 to see if you can correlate fan stops and starts with temperatures. Use a chrono as well to see if there might be a timing pattern.
Good luck,