Hello Dark Mantis,
Thanks for the advice, I spent all day troubleshooting this and I did remove and reseat the CPU and cooler as a part of that process.
What seemed to work (not reliably mind you) was something like what is mentioned here:
http://www.xtremesystems.org/forums/showthread.php?t=263598&page=9This part in particular at least got me intermittently back into the BIOS which was enough to reset it and slowly things stabilized.
It is possible to make the BIOS Auto-Recovery kick in (Dual BIOS) and re-flash the MAIN BIOS with the contents of the BACKUP BIOS.
This is a simple and easy method for anyone to try before having to resort to other more difficult methods, or a RMA.
1. Shut off the power supply using the switch on the back of the PSU, wait 10-15 seconds.
2. Press and hold the case Power On swtich, then while still holding turn on the power supply from the switch on the rear.
3. Still holding the case power on switch, the board will start, once it does release the case power on switch and shut off the power supply via the switch on the read of the unit. (Do the latter two parts as quickly as you can once the board starts)
4. The board will shut down.
5. Turn the power supply back on using the switch on the rear of the unit.
6. Turn on the motherboard by pressing the case power on button.
Once the board starts this time you should see the Gigabyte splash screen, or POST page, then the Auto-Recovery from Dual BIOS will kick in. You will see a checksum error, and then recovery from BACKUP BIOS will begin. Once it is done reboot your machine and enter the BIOS and load optimized defaults then save/apply/reboot back to BIOS.
Now you are done, and will be using whatever BIOS was in your BACKUP BIOS, From there you can attempt whatever you were previously trying, or update your BIOS to the latest version.
Now I should point out that during the course of the day I tried the above along with the Clear CMOS button and sometimes it worked and sometimes it didn't. Eventually it booted and continued to boot as I slowly added each component one at a time.
Almost 12hrs later and it seems stable, at least it boots and recognizes all the components... even if windows did have conniptions about losing its "activated" status as the OS came into play.
Now I only have two things outstanding with regards to the board.
I cannot update to F6 of the BIOS using either @BIOS or Flashing it via the Bios Setup Screens. The file (via http or ftp) for F6 always reports as being corrupt in Flash-Bios and in @BIOS windows throws up a "stopped responding" message immediately upon the completion of the download and read phases. Nothing seemed to work to go to F6. I DID manage to go from F3 (the original) to F4 without any problems though. I tried F7a... same result as F6, corrupted file. (I downloaded multiple times from multiple servers located in Asia, China, USA, etc... always corrupt.)
I also don't seem to be able to get dual channel RAM working. I have 4 sticks of ram in there now, 2x4GB and 2x2GB, and was of the understanding that if the channels matched then there would be no problem with that (they have the same timings and speed, despite the size difference). I changed the BIOS Memory Management to be Expert and enabled channel and rank interleaving... not sure I should have done that though...?
Was I wrong to expect the use of dual channel to report the RAM to the OS as half of what it actually is? I just assumed...?
So it could have been the CPU seating or the cooler, or anything since I went all the way back to nothing on the board and worked forward from there. Still the only thing that seemed to have a sliver of success was what the above quoted section recommended (along with many applications of the Clear CMOS button, sometimes at the same time as the above procedure!). Once it began booting it had a bout of failures again, where I had to apply various and prolonged combinations of buttons and power switches, then it booted again and has stayed up since.
I've never had a MB this... finicky... fussy... or troublesome. Now I just hope it stays stable... from now on would be preferred.
Thanks for the help Dark Mantis.
Best wishes, Niekell